Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRTM1Q9HBL6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 VENTXP7-201ENST00000475503 772 ntBASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRTM1Q9HBL6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 AC009533.2-201ENST00000543664 586 ntBASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRTM1Q9HBL6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 AL118508.1-201ENST00000613502 2345 ntBASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LRTM1Q9HBL6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms