Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.6■□□□□ 0.25
PIF1Q9H611 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
PIF1Q9H611 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.6■□□□□ 0.25
PIF1Q9H611 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 AC004263.2-201ENST00000617183 678 ntBASIC16.6■□□□□ 0.25
PIF1Q9H611 AL031432.5-201ENST00000641059 760 ntBASIC16.6■□□□□ 0.25
PIF1Q9H611 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.6■□□□□ 0.25
PIF1Q9H611 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 RNF216P1-203ENST00000404404 2427 ntBASIC16.6■□□□□ 0.25
PIF1Q9H611 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PIF1Q9H611 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.6■□□□□ 0.25
PIF1Q9H611 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
PIF1Q9H611 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PIF1Q9H611 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PIF1Q9H611 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 DOC2GP-204ENST00000639052 2548 ntBASIC16.59■□□□□ 0.25
PIF1Q9H611 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PIF1Q9H611 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 ECEL1P3-201ENST00000427961 737 ntBASIC16.59■□□□□ 0.25
PIF1Q9H611 LIN28AP1-201ENST00000429574 405 ntBASIC16.59■□□□□ 0.25
PIF1Q9H611 AC112698.1-201ENST00000510299 916 ntBASIC16.59■□□□□ 0.25
PIF1Q9H611 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.59■□□□□ 0.25
PIF1Q9H611 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 AL138966.2-201ENST00000621997 464 ntBASIC16.59■□□□□ 0.25
PIF1Q9H611 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PIF1Q9H611 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.59■□□□□ 0.25
PIF1Q9H611 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PIF1Q9H611 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PIF1Q9H611 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
PIF1Q9H611 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PIF1Q9H611 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PIF1Q9H611 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PIF1Q9H611 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
PIF1Q9H611 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PIF1Q9H611 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PIF1Q9H611 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.58■□□□□ 0.25
PIF1Q9H611 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.58■□□□□ 0.24
PIF1Q9H611 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PIF1Q9H611 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.58■□□□□ 0.24
PIF1Q9H611 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.58■□□□□ 0.24
PIF1Q9H611 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.58■□□□□ 0.24
PIF1Q9H611 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.58■□□□□ 0.24
PIF1Q9H611 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.58■□□□□ 0.24
PIF1Q9H611 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.58■□□□□ 0.24
PIF1Q9H611 AC079602.3-201ENST00000623931 403 ntBASIC16.58■□□□□ 0.24
PIF1Q9H611 LINC01311-201ENST00000565162 1445 ntBASIC16.58■□□□□ 0.24
PIF1Q9H611 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.58■□□□□ 0.24
PIF1Q9H611 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.58■□□□□ 0.24
PIF1Q9H611 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.58■□□□□ 0.24
PIF1Q9H611 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PIF1Q9H611 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.58■□□□□ 0.24
PIF1Q9H611 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PIF1Q9H611 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PIF1Q9H611 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PIF1Q9H611 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms