Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC68Q9H2F9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 AL845331.1-201ENST00000424978 1190 ntBASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 AP000550.4-202ENST00000639755 178 ntBASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC68Q9H2F9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 MINOS1P3-201ENST00000457048 203 ntBASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 AC084018.2-201ENST00000613093 2607 ntBASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC68Q9H2F9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC68Q9H2F9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms