Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 MIR638-201ENST00000385237 100 ntBASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 KSR1P1-201ENST00000446298 240 ntBASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 AC083880.1-201ENST00000608266 535 ntBASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLIRPQ9GZT3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 AC011506.1-201ENST00000474329 610 ntBASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 AC008687.5-201ENST00000593746 558 ntBASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 AL353708.3-201ENST00000610272 989 ntBASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SLIRPQ9GZT3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 AC010491.1-201ENST00000563101 2797 ntBASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 AL645728.1-201ENST00000366221 2101 ntBASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLIRPQ9GZT3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms