Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 AC004967.1-201ENST00000453589 447 ntBASIC17.12■□□□□ 0.33
HDAC8Q9BY41 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.12■□□□□ 0.33
HDAC8Q9BY41 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 AC093525.9-201ENST00000624961 1746 ntBASIC17.11■□□□□ 0.33
HDAC8Q9BY41 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 SLC25A1P3-201ENST00000395415 828 ntBASIC17.11■□□□□ 0.33
HDAC8Q9BY41 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 HTR5BP-201ENST00000430851 1154 ntBASIC17.11■□□□□ 0.33
HDAC8Q9BY41 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 AC107918.2-201ENST00000530817 355 ntBASIC17.11■□□□□ 0.33
HDAC8Q9BY41 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 AC134684.3-201ENST00000641758 218 ntBASIC17.11■□□□□ 0.33
HDAC8Q9BY41 AC079781.4-201ENST00000641908 219 ntBASIC17.11■□□□□ 0.33
HDAC8Q9BY41 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC8Q9BY41 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 AC116353.5-201ENST00000638148 1699 ntBASIC17.1■□□□□ 0.33
HDAC8Q9BY41 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 AC211486.1-202ENST00000416371 468 ntBASIC17.1■□□□□ 0.33
HDAC8Q9BY41 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 AL513480.1-201ENST00000451731 511 ntBASIC17.1■□□□□ 0.33
HDAC8Q9BY41 ALG1L5P-201ENST00000482043 771 ntBASIC17.1■□□□□ 0.33
HDAC8Q9BY41 AC211476.1-201ENST00000503899 468 ntBASIC17.1■□□□□ 0.33
HDAC8Q9BY41 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 REXO1L3P-201ENST00000622202 1288 ntBASIC17.1■□□□□ 0.33
HDAC8Q9BY41 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC8Q9BY41 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms