Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 MIR149-201ENST00000384879 89 ntBASIC17.49■□□□□ 0.39
PHOX2BQ99453 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.49■□□□□ 0.39
PHOX2BQ99453 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 AC017083.2-201ENST00000608069 979 ntBASIC17.49■□□□□ 0.39
PHOX2BQ99453 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.49■□□□□ 0.39
PHOX2BQ99453 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PHOX2BQ99453 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.49■□□□□ 0.39
PHOX2BQ99453 AC104581.1-202ENST00000635932 2618 ntBASIC17.49■□□□□ 0.39
PHOX2BQ99453 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 AC026120.1-201ENST00000611536 926 ntBASIC17.48■□□□□ 0.39
PHOX2BQ99453 AP001059.3-201ENST00000619053 235 ntBASIC17.48■□□□□ 0.39
PHOX2BQ99453 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PHOX2BQ99453 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PHOX2BQ99453 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PHOX2BQ99453 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PHOX2BQ99453 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms