Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 WIZP1-201ENST00000531444 2299 ntBASIC14.62□□□□□ -0.07
CSMD1Q96PZ7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD1Q96PZ7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 IGHV3-42-201ENST00000520410 361 ntBASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 MYCLP1-201ENST00000372451 1075 ntBASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 FAM86C2P-203ENST00000528684 1004 ntBASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 UXT-AS1-201ENST00000590504 1525 ntBASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 AC140658.5-201ENST00000438532 169 ntBASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 AC004233.3-201ENST00000607794 1269 ntBASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD1Q96PZ7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD1Q96PZ7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms