Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 RPPH1-201ENST00000516869 333 ntBASIC14.92□□□□□ -0.02
CMTM3Q96MX0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 AC024563.2-201ENST00000603282 481 ntBASIC14.92□□□□□ -0.02
CMTM3Q96MX0 AC024243.1-201ENST00000609234 778 ntBASIC14.92□□□□□ -0.02
CMTM3Q96MX0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 AC116562.4-202ENST00000641738 218 ntBASIC14.92□□□□□ -0.02
CMTM3Q96MX0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CMTM3Q96MX0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.91□□□□□ -0.02
CMTM3Q96MX0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 AC007663.1-201ENST00000438948 1240 ntBASIC14.91□□□□□ -0.02
CMTM3Q96MX0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 CD99P1-205ENST00000527459 561 ntBASIC14.91□□□□□ -0.02
CMTM3Q96MX0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 REXO1L10P-201ENST00000615707 1290 ntBASIC14.91□□□□□ -0.02
CMTM3Q96MX0 REXO1L12P-201ENST00000622156 912 ntBASIC14.91□□□□□ -0.02
CMTM3Q96MX0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CMTM3Q96MX0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.9□□□□□ -0.02
CMTM3Q96MX0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CMTM3Q96MX0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CMTM3Q96MX0 AC104640.1-201ENST00000562617 2109 ntBASIC14.9□□□□□ -0.02
CMTM3Q96MX0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms