Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTP4Q96DX8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 BCL2-203ENST00000589955 5011 ntBASIC17.66■□□□□ 0.42
RTP4Q96DX8 AC078925.2-201ENST00000624013 1973 ntBASIC17.66■□□□□ 0.42
RTP4Q96DX8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RTP4Q96DX8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 LINC00265-3P-201ENST00000447588 903 ntBASIC17.65■□□□□ 0.42
RTP4Q96DX8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 RN7SL510P-201ENST00000581311 263 ntBASIC17.65■□□□□ 0.42
RTP4Q96DX8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTP4Q96DX8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 AC148477.5-201ENST00000625164 1645 ntBASIC17.65■□□□□ 0.42
RTP4Q96DX8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RTP4Q96DX8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.64■□□□□ 0.42
RTP4Q96DX8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.64■□□□□ 0.42
RTP4Q96DX8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTP4Q96DX8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RTP4Q96DX8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 HTR7P1-202ENST00000624664 4411 ntBASIC17.64■□□□□ 0.41
RTP4Q96DX8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTP4Q96DX8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTP4Q96DX8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTP4Q96DX8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 SPDYE21P-201ENST00000413323 827 ntBASIC17.64■□□□□ 0.41
RTP4Q96DX8 ACTG1P4-201ENST00000425123 1122 ntBASIC17.64■□□□□ 0.41
RTP4Q96DX8 NUS1P1-201ENST00000446295 882 ntBASIC17.64■□□□□ 0.41
RTP4Q96DX8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 AC073592.4-201ENST00000623827 446 ntBASIC17.64■□□□□ 0.41
RTP4Q96DX8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTP4Q96DX8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTP4Q96DX8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTP4Q96DX8 SIGLEC16-201ENST00000599858 1437 ntBASIC17.64■□□□□ 0.41
RTP4Q96DX8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTP4Q96DX8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RTP4Q96DX8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.62■□□□□ 0.41
RTP4Q96DX8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTP4Q96DX8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms