Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 AC092865.6-201ENST00000642101 219 ntBASIC18.75■□□□□ 0.59
PGBD4Q96DM1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PGBD4Q96DM1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 IGLL3P-201ENST00000412472 434 ntBASIC18.74■□□□□ 0.59
PGBD4Q96DM1 AC211486.1-202ENST00000416371 468 ntBASIC18.74■□□□□ 0.59
PGBD4Q96DM1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 AC211476.1-201ENST00000503899 468 ntBASIC18.74■□□□□ 0.59
PGBD4Q96DM1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 AP001160.2-201ENST00000596071 487 ntBASIC18.74■□□□□ 0.59
PGBD4Q96DM1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 AC134684.3-201ENST00000641758 218 ntBASIC18.74■□□□□ 0.59
PGBD4Q96DM1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PGBD4Q96DM1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 C20orf181-201ENST00000623918 480 ntBASIC18.73■□□□□ 0.59
PGBD4Q96DM1 AC007064.4-201ENST00000637740 555 ntBASIC18.73■□□□□ 0.59
PGBD4Q96DM1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.73■□□□□ 0.59
PGBD4Q96DM1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PGBD4Q96DM1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms