Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AC140658.5-201ENST00000438532 169 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 CNN2P2-201ENST00000443536 909 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 CNN2P3-201ENST00000450201 906 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AC087163.2-201ENST00000457299 853 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AL136317.3-201ENST00000618497 906 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 AP000997.3-201ENST00000623333 2250 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 BCL2-203ENST00000589955 5011 ntBASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNRNP40Q96DI7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 REXO1L9P-201ENST00000604264 2108 ntBASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 AC069335.1-201ENST00000489972 472 ntBASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 AF228730.6-201ENST00000641497 218 ntBASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 AC084121.3-201ENST00000641716 218 ntBASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 AC105233.6-201ENST00000642093 218 ntBASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 AC046185.3-201ENST00000623228 1824 ntBASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SNRNP40Q96DI7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AC015922.1-201ENST00000421102 1152 ntBASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 BASP1P1-201ENST00000430708 665 ntBASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AC055876.3-201ENST00000431496 288 ntBASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AC079140.1-201ENST00000508039 487 ntBASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AC138649.4-201ENST00000612222 287 ntBASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AL645728.2-201ENST00000641974 660 ntBASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRNP40Q96DI7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms