Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.31■□□□□ 0.04
AP3S1Q92572 CR392000.1-201ENST00000624770 1228 ntBASIC15.31■□□□□ 0.04
AP3S1Q92572 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
AP3S1Q92572 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
AP3S1Q92572 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP3S1Q92572 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP3S1Q92572 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S1Q92572 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S1Q92572 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
AP3S1Q92572 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3S1Q92572 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3S1Q92572 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
AP3S1Q92572 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.3■□□□□ 0.04
AP3S1Q92572 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.3■□□□□ 0.04
AP3S1Q92572 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
AP3S1Q92572 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.3■□□□□ 0.04
AP3S1Q92572 AC011506.1-201ENST00000474329 610 ntBASIC15.3■□□□□ 0.04
AP3S1Q92572 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
AP3S1Q92572 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.3■□□□□ 0.04
AP3S1Q92572 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.3■□□□□ 0.04
AP3S1Q92572 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.3■□□□□ 0.04
AP3S1Q92572 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
AP3S1Q92572 AL139327.4-201ENST00000612362 153 ntBASIC15.3■□□□□ 0.04
AP3S1Q92572 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3S1Q92572 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.3■□□□□ 0.04
AP3S1Q92572 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
AP3S1Q92572 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S1Q92572 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 AC024909.3-201ENST00000611513 2257 ntBASIC15.29■□□□□ 0.04
AP3S1Q92572 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 FSCN1P1-201ENST00000568912 1481 ntBASIC15.29■□□□□ 0.04
AP3S1Q92572 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.29■□□□□ 0.04
AP3S1Q92572 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 UNC93B5-201ENST00000530315 699 ntBASIC15.29■□□□□ 0.04
AP3S1Q92572 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP3S1Q92572 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
AP3S1Q92572 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP3S1Q92572 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.29■□□□□ 0.04
AP3S1Q92572 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms