Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 AC132938.5-201ENST00000624980 1813 ntBASIC16.94■□□□□ 0.3
ATL1Q8WXF7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATL1Q8WXF7 AL391005.1-201ENST00000623953 2435 ntBASIC16.94■□□□□ 0.3
ATL1Q8WXF7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 ABCD1P5-201ENST00000445663 754 ntBASIC16.93■□□□□ 0.3
ATL1Q8WXF7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 AC138894.3-201ENST00000603787 634 ntBASIC16.93■□□□□ 0.3
ATL1Q8WXF7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 AP000867.4-201ENST00000641616 219 ntBASIC16.93■□□□□ 0.3
ATL1Q8WXF7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
ATL1Q8WXF7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATL1Q8WXF7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms