Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 AC129492.6-201ENST00000611383 1305 ntBASIC15.56■□□□□ 0.08
RNF138Q8WVD3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.56■□□□□ 0.08
RNF138Q8WVD3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RNF138Q8WVD3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 ZNF259P1-201ENST00000407656 1365 ntBASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 FAM185BP-201ENST00000443595 716 ntBASIC15.55■□□□□ 0.08
RNF138Q8WVD3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 ACTL9-202ENST00000612068 1252 ntBASIC15.55■□□□□ 0.08
RNF138Q8WVD3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF138Q8WVD3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 KRT8P49-201ENST00000604166 1432 ntBASIC15.54■□□□□ 0.08
RNF138Q8WVD3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 FAM197Y3-203ENST00000618346 717 ntBASIC15.54■□□□□ 0.08
RNF138Q8WVD3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF138Q8WVD3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNF138Q8WVD3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.53■□□□□ 0.08
RNF138Q8WVD3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNF138Q8WVD3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms