Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AL020989.1-201ENST00000422979 469 ntBASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 AP001269.4-201ENST00000609611 512 ntBASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 AL121772.3-201ENST00000610840 674 ntBASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDH19Q8TAB3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 AC091304.2-201ENST00000564639 760 ntBASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 AC073592.4-201ENST00000623827 446 ntBASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 AP005117.1-201ENST00000584346 1413 ntBASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 SIGLEC16-201ENST00000599858 1437 ntBASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDH19Q8TAB3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 FAAHP1-202ENST00000446499 1238 ntBASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 SIGLEC30P-201ENST00000455569 941 ntBASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 AC079776.2-201ENST00000641154 1609 ntBASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDH19Q8TAB3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 AC004817.3-201ENST00000602957 2129 ntBASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 KRT18P31-201ENST00000506277 1292 ntBASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDH19Q8TAB3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms