Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 CLEC4GP1-201ENST00000596555 870 ntBASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIMC1Q8NDZ2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AC132938.5-201ENST00000624980 1813 ntBASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AC002558.1-201ENST00000488906 803 ntBASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AD001527.2-201ENST00000622994 785 ntBASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 AL353593.2-201ENST00000602529 1483 ntBASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIMC1Q8NDZ2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 POM121L3P-201ENST00000419331 1163 ntBASIC16.34■□□□□ 0.21
SIMC1Q8NDZ2 DUSP5P1-201ENST00000441325 1139 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms