Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 AL805961.1-202ENST00000641562 540 ntBASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 EGFEM1P-202ENST00000431685 1563 ntBASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAM1L1Q8N609 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 PTCHD3P3-201ENST00000403073 906 ntBASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 AC098831.1-202ENST00000438821 336 ntBASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 RPS15P9-201ENST00000494093 319 ntBASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAM1L1Q8N609 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRAM1L1Q8N609 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 AP002414.1-201ENST00000391405 1147 ntBASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 BX640515.1-201ENST00000617215 977 ntBASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 AC117500.6-201ENST00000624871 588 ntBASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAM1L1Q8N609 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 IL9RP2-201ENST00000423948 1312 ntBASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 AL590627.1-203ENST00000421194 1026 ntBASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 IGHV3-22-201ENST00000520721 359 ntBASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAM1L1Q8N609 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms