Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 EGFEM1P-202ENST00000431685 1563 ntBASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 AC005915.1-201ENST00000624912 2018 ntBASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 AC019129.2-201ENST00000609837 1235 ntBASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01561Q8N1V8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 COX11P1-201ENST00000489116 835 ntBASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC01561Q8N1V8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
LINC01561Q8N1V8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms