Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
UBR1Q8IWV7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 LINC00895-201ENST00000629028 1637 ntBASIC24.28■■□□□ 1.48
UBR1Q8IWV7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 RNA5-8SN1-201ENST00000610460 153 ntBASIC24.28■■□□□ 1.48
UBR1Q8IWV7 RNA5-8SN5-202ENST00000612463 153 ntBASIC24.28■■□□□ 1.48
UBR1Q8IWV7 RNA5-8SN4-201ENST00000613359 153 ntBASIC24.28■■□□□ 1.48
UBR1Q8IWV7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 RNA5-8SN5-201ENST00000619471 153 ntBASIC24.28■■□□□ 1.48
UBR1Q8IWV7 LINC01451-201ENST00000623792 534 ntBASIC24.28■■□□□ 1.48
UBR1Q8IWV7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC24.28■■□□□ 1.48
UBR1Q8IWV7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 SLC25A1P3-201ENST00000395415 828 ntBASIC24.27■■□□□ 1.48
UBR1Q8IWV7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 HLA-V-204ENST00000476601 1289 ntBASIC24.27■■□□□ 1.48
UBR1Q8IWV7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
UBR1Q8IWV7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
UBR1Q8IWV7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 AC138969.3-201ENST00000546612 1459 ntBASIC24.25■■□□□ 1.47
UBR1Q8IWV7 AC138932.2-201ENST00000548268 1459 ntBASIC24.25■■□□□ 1.47
UBR1Q8IWV7 AC126755.4-201ENST00000549796 1459 ntBASIC24.25■■□□□ 1.47
UBR1Q8IWV7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC24.25■■□□□ 1.47
UBR1Q8IWV7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 AC017083.2-201ENST00000608069 979 ntBASIC24.24■■□□□ 1.47
UBR1Q8IWV7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC24.24■■□□□ 1.47
UBR1Q8IWV7 AC009407.1-201ENST00000568958 598 ntBASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms