Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHFQ7M4L6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHFQ7M4L6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHFQ7M4L6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHFQ7M4L6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHFQ7M4L6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
SHFQ7M4L6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 HLA-F-220ENST00000434407 884 ntBASIC15.7■□□□□ 0.1
SHFQ7M4L6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 AC004263.2-201ENST00000617183 678 ntBASIC15.7■□□□□ 0.1
SHFQ7M4L6 AC079602.3-201ENST00000623931 403 ntBASIC15.7■□□□□ 0.1
SHFQ7M4L6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 AL603756.1-201ENST00000606511 2163 ntBASIC15.7■□□□□ 0.1
SHFQ7M4L6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.7■□□□□ 0.1
SHFQ7M4L6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHFQ7M4L6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 STARP1-201ENST00000397973 869 ntBASIC15.69■□□□□ 0.1
SHFQ7M4L6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.69■□□□□ 0.1
SHFQ7M4L6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 AC112698.1-201ENST00000510299 916 ntBASIC15.69■□□□□ 0.1
SHFQ7M4L6 AC093827.2-201ENST00000512654 315 ntBASIC15.69■□□□□ 0.1
SHFQ7M4L6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.69■□□□□ 0.1
SHFQ7M4L6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 MST1L-201ENST00000442552 2185 ntBASIC15.69■□□□□ 0.1
SHFQ7M4L6 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.69■□□□□ 0.1
SHFQ7M4L6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SHFQ7M4L6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SHFQ7M4L6 AL513477.1-201ENST00000602865 2407 ntBASIC15.68■□□□□ 0.1
SHFQ7M4L6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SHFQ7M4L6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms