Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 AC087388.1-201ENST00000571370 1112 ntBASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 BNIP3P18-201ENST00000593976 575 ntBASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LETMD1Q6P1Q0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 TNRC18P3-201ENST00000441896 2691 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 RNF216P1-203ENST00000404404 2427 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 KLF4P1-201ENST00000412782 1185 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 TOB2P1-201ENST00000469761 992 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 Z69720.1-201ENST00000601483 472 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 AL139384.1-201ENST00000612143 3047 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 UBALD1-205ENST00000590891 2641 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 IER3-202ENST00000376377 1350 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 PCDHA14-201ENST00000506751 2298 ntBASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LETMD1Q6P1Q0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 INTS4P1-201ENST00000438455 1935 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 AC003669.1-201ENST00000334569 611 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 KRT17P6-201ENST00000453795 1220 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 AC096582.2-201ENST00000510860 516 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 AC124947.2-201ENST00000547118 1133 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 AC073592.5-201ENST00000624854 528 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 NSUN5P1-202ENST00000421140 1535 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 NSUN5P2-203ENST00000457352 1529 ntBASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LETMD1Q6P1Q0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms