Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD4Q5XG99 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
LYSMD4Q5XG99 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD4Q5XG99 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 AC020763.4-201ENST00000623414 4170 ntBASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 HTR7P1-202ENST00000624664 4411 ntBASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 GPS2P2-201ENST00000430745 888 ntBASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 IGHV3-42-201ENST00000520410 361 ntBASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 UXT-AS1-201ENST00000590504 1525 ntBASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD4Q5XG99 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 SPDYE7P-202ENST00000420373 878 ntBASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 AC140878.1-201ENST00000565277 250 ntBASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 AC005412.3-201ENST00000580309 715 ntBASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 AC012645.4-201ENST00000610691 1061 ntBASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD4Q5XG99 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 KRT8P23-201ENST00000560090 1207 ntBASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 RN7SL204P-201ENST00000582831 262 ntBASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 REXO1L11P-201ENST00000620964 1927 ntBASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD4Q5XG99 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms