Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 AC025678.2-201ENST00000562061 970 ntBASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 MIR4745-201ENST00000577608 62 ntBASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CTC1Q2NKJ3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 SIGLEC30P-201ENST00000455569 941 ntBASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 AC109322.1-201ENST00000524499 1264 ntBASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 AL121761.2-201ENST00000598007 1648 ntBASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 GNAS-203ENST00000306120 1878 ntBASIC18.48■□□□□ 0.55
CTC1Q2NKJ3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 AC190387.1-201ENST00000551683 408 ntBASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CTC1Q2NKJ3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms