Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 AL590326.2-201ENST00000625139 305 ntBASIC16.14■□□□□ 0.17
SYPL1Q16563 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.14■□□□□ 0.17
SYPL1Q16563 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.14■□□□□ 0.17
SYPL1Q16563 TP73-AS1-210ENST00000637775 1455 ntBASIC16.14■□□□□ 0.17
SYPL1Q16563 AC132938.5-201ENST00000624980 1813 ntBASIC16.14■□□□□ 0.17
SYPL1Q16563 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.14■□□□□ 0.17
SYPL1Q16563 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SYPL1Q16563 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.14■□□□□ 0.17
SYPL1Q16563 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SYPL1Q16563 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.14■□□□□ 0.17
SYPL1Q16563 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SYPL1Q16563 IER3-202ENST00000376377 1350 ntBASIC16.13■□□□□ 0.17
SYPL1Q16563 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SYPL1Q16563 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SYPL1Q16563 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SYPL1Q16563 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.13■□□□□ 0.17
SYPL1Q16563 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.13■□□□□ 0.17
SYPL1Q16563 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.13■□□□□ 0.17
SYPL1Q16563 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.13■□□□□ 0.17
SYPL1Q16563 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 DRAXINP1-201ENST00000437611 948 ntBASIC16.13■□□□□ 0.17
SYPL1Q16563 TOB2P1-201ENST00000469761 992 ntBASIC16.13■□□□□ 0.17
SYPL1Q16563 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.13■□□□□ 0.17
SYPL1Q16563 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.13■□□□□ 0.17
SYPL1Q16563 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.13■□□□□ 0.17
SYPL1Q16563 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SYPL1Q16563 Z69720.1-201ENST00000601483 472 ntBASIC16.13■□□□□ 0.17
SYPL1Q16563 AL135999.2-201ENST00000622438 1686 ntBASIC16.13■□□□□ 0.17
SYPL1Q16563 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.13■□□□□ 0.17
SYPL1Q16563 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.13■□□□□ 0.17
SYPL1Q16563 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SYPL1Q16563 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.13■□□□□ 0.17
SYPL1Q16563 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SYPL1Q16563 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.13■□□□□ 0.17
SYPL1Q16563 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYPL1Q16563 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
SYPL1Q16563 AC009336.1-201ENST00000608941 1553 ntBASIC16.13■□□□□ 0.17
SYPL1Q16563 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.13■□□□□ 0.17
SYPL1Q16563 AC092068.3-201ENST00000587894 2016 ntBASIC16.12■□□□□ 0.17
SYPL1Q16563 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SYPL1Q16563 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.12■□□□□ 0.17
SYPL1Q16563 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SYPL1Q16563 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.12■□□□□ 0.17
SYPL1Q16563 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 MINOS1P3-201ENST00000457048 203 ntBASIC16.12■□□□□ 0.17
SYPL1Q16563 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.12■□□□□ 0.17
SYPL1Q16563 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.12■□□□□ 0.17
SYPL1Q16563 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.12■□□□□ 0.17
SYPL1Q16563 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 AD001527.2-201ENST00000622994 785 ntBASIC16.12■□□□□ 0.17
SYPL1Q16563 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.12■□□□□ 0.17
SYPL1Q16563 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYPL1Q16563 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SYPL1Q16563 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms