Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFX1Q12986 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFX1Q12986 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFX1Q12986 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 GPR89P-201ENST00000407924 1495 ntBASIC19.04■□□□□ 0.64
NFX1Q12986 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NFX1Q12986 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 AC211486.1-202ENST00000416371 468 ntBASIC19.04■□□□□ 0.64
NFX1Q12986 MCCD1P2-201ENST00000423228 335 ntBASIC19.04■□□□□ 0.64
NFX1Q12986 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.04■□□□□ 0.64
NFX1Q12986 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NFX1Q12986 AC211476.1-201ENST00000503899 468 ntBASIC19.04■□□□□ 0.64
NFX1Q12986 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
NFX1Q12986 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NFX1Q12986 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.04■□□□□ 0.64
NFX1Q12986 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.04■□□□□ 0.64
NFX1Q12986 AL805961.1-202ENST00000641562 540 ntBASIC19.04■□□□□ 0.64
NFX1Q12986 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NFX1Q12986 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.04■□□□□ 0.64
NFX1Q12986 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NFX1Q12986 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NFX1Q12986 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
NFX1Q12986 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 GNAS-203ENST00000306120 1878 ntBASIC19.03■□□□□ 0.64
NFX1Q12986 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.03■□□□□ 0.64
NFX1Q12986 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
NFX1Q12986 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NFX1Q12986 MRPL20P1-201ENST00000400819 433 ntBASIC19.03■□□□□ 0.64
NFX1Q12986 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.03■□□□□ 0.64
NFX1Q12986 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.03■□□□□ 0.64
NFX1Q12986 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.03■□□□□ 0.64
NFX1Q12986 AC005829.1-201ENST00000570002 483 ntBASIC19.03■□□□□ 0.64
NFX1Q12986 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.03■□□□□ 0.64
NFX1Q12986 AL353135.1-201ENST00000606729 504 ntBASIC19.03■□□□□ 0.64
NFX1Q12986 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NFX1Q12986 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.03■□□□□ 0.64
NFX1Q12986 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NFX1Q12986 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.03■□□□□ 0.64
NFX1Q12986 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFX1Q12986 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.03■□□□□ 0.64
NFX1Q12986 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
NFX1Q12986 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.02■□□□□ 0.64
NFX1Q12986 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NFX1Q12986 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.02■□□□□ 0.64
NFX1Q12986 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 DNAJB3-202ENST00000449667 1266 ntBASIC19.02■□□□□ 0.64
NFX1Q12986 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.02■□□□□ 0.64
NFX1Q12986 AL513190.1-201ENST00000621254 727 ntBASIC19.02■□□□□ 0.64
NFX1Q12986 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NFX1Q12986 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFX1Q12986 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NFX1Q12986 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NFX1Q12986 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.02■□□□□ 0.63
NFX1Q12986 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NFX1Q12986 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFX1Q12986 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NFX1Q12986 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFX1Q12986 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NFX1Q12986 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFX1Q12986 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFX1Q12986 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NFX1Q12986 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NFX1Q12986 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms