Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DSC1Q08554 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DSC1Q08554 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DSC1Q08554 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DSC1Q08554 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DSC1Q08554 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.29■□□□□ 0.52
DSC1Q08554 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.29■□□□□ 0.52
DSC1Q08554 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.29■□□□□ 0.52
DSC1Q08554 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.29■□□□□ 0.52
DSC1Q08554 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.29■□□□□ 0.52
DSC1Q08554 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DSC1Q08554 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DSC1Q08554 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.29■□□□□ 0.52
DSC1Q08554 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DSC1Q08554 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DSC1Q08554 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.28■□□□□ 0.52
DSC1Q08554 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.28■□□□□ 0.52
DSC1Q08554 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.28■□□□□ 0.52
DSC1Q08554 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
DSC1Q08554 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 AL355306.1-201ENST00000415580 579 ntBASIC18.28■□□□□ 0.52
DSC1Q08554 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 TSEN15P1-201ENST00000423257 515 ntBASIC18.28■□□□□ 0.52
DSC1Q08554 AL645939.2-201ENST00000427340 991 ntBASIC18.28■□□□□ 0.52
DSC1Q08554 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
DSC1Q08554 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.28■□□□□ 0.52
DSC1Q08554 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.28■□□□□ 0.52
DSC1Q08554 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.28■□□□□ 0.52
DSC1Q08554 AC005412.3-201ENST00000580309 715 ntBASIC18.28■□□□□ 0.52
DSC1Q08554 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.28■□□□□ 0.52
DSC1Q08554 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 EGFEM1P-202ENST00000431685 1563 ntBASIC18.28■□□□□ 0.52
DSC1Q08554 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.28■□□□□ 0.52
DSC1Q08554 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.28■□□□□ 0.52
DSC1Q08554 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
DSC1Q08554 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DSC1Q08554 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
DSC1Q08554 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DSC1Q08554 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
DSC1Q08554 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DSC1Q08554 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
DSC1Q08554 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.27■□□□□ 0.52
DSC1Q08554 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DSC1Q08554 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.27■□□□□ 0.52
DSC1Q08554 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.27■□□□□ 0.52
DSC1Q08554 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DSC1Q08554 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.27■□□□□ 0.52
DSC1Q08554 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.27■□□□□ 0.52
DSC1Q08554 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
DSC1Q08554 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DSC1Q08554 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DSC1Q08554 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.27■□□□□ 0.51
DSC1Q08554 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DSC1Q08554 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.27■□□□□ 0.51
DSC1Q08554 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.27■□□□□ 0.51
DSC1Q08554 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.26■□□□□ 0.51
DSC1Q08554 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.26■□□□□ 0.51
DSC1Q08554 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
DSC1Q08554 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
DSC1Q08554 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.26■□□□□ 0.51
DSC1Q08554 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.26■□□□□ 0.51
DSC1Q08554 HMGA1P7-201ENST00000406908 502 ntBASIC18.26■□□□□ 0.51
DSC1Q08554 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.26■□□□□ 0.51
DSC1Q08554 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
DSC1Q08554 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.26■□□□□ 0.51
DSC1Q08554 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DSC1Q08554 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.26■□□□□ 0.51
DSC1Q08554 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
DSC1Q08554 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DSC1Q08554 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms