Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 AP001160.2-201ENST00000596071 487 ntBASIC18.81■□□□□ 0.6
CDC42EP1Q00587 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 AC134684.3-201ENST00000641758 218 ntBASIC18.81■□□□□ 0.6
CDC42EP1Q00587 AL645728.2-201ENST00000641974 660 ntBASIC18.81■□□□□ 0.6
CDC42EP1Q00587 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.81■□□□□ 0.6
CDC42EP1Q00587 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 GNAS-203ENST00000306120 1878 ntBASIC18.8■□□□□ 0.6
CDC42EP1Q00587 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 AL513480.1-201ENST00000451731 511 ntBASIC18.8■□□□□ 0.6
CDC42EP1Q00587 AC092183.1-201ENST00000469884 875 ntBASIC18.8■□□□□ 0.6
CDC42EP1Q00587 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.8■□□□□ 0.6
CDC42EP1Q00587 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 ACTL9-202ENST00000612068 1252 ntBASIC18.79■□□□□ 0.6
CDC42EP1Q00587 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDC42EP1Q00587 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.79■□□□□ 0.6
CDC42EP1Q00587 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 ELL2P1-201ENST00000413990 1906 ntBASIC18.78■□□□□ 0.6
CDC42EP1Q00587 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 AC254562.1-201ENST00000417586 456 ntBASIC18.78■□□□□ 0.6
CDC42EP1Q00587 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.78■□□□□ 0.6
CDC42EP1Q00587 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms