Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SDHAP2-201ENST00000455183 2001 ntBASIC15.23■□□□□ 0.03
SEC61A1P61619 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 MIR149-201ENST00000384879 89 ntBASIC15.23■□□□□ 0.03
SEC61A1P61619 ATP5G2P1-201ENST00000433580 426 ntBASIC15.23■□□□□ 0.03
SEC61A1P61619 AP003733.1-201ENST00000491725 852 ntBASIC15.23■□□□□ 0.03
SEC61A1P61619 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 AC009065.1-201ENST00000564055 1225 ntBASIC15.23■□□□□ 0.03
SEC61A1P61619 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.23■□□□□ 0.03
SEC61A1P61619 AC005332.3-201ENST00000589904 676 ntBASIC15.23■□□□□ 0.03
SEC61A1P61619 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SEC61A1P61619 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SEC61A1P61619 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.23■□□□□ 0.03
SEC61A1P61619 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.23■□□□□ 0.03
SEC61A1P61619 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.23■□□□□ 0.03
SEC61A1P61619 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SEC61A1P61619 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SEC61A1P61619 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SEC61A1P61619 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 KRT18P48-201ENST00000434763 852 ntBASIC15.22■□□□□ 0.03
SEC61A1P61619 AP002383.4-201ENST00000442518 975 ntBASIC15.22■□□□□ 0.03
SEC61A1P61619 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.22■□□□□ 0.03
SEC61A1P61619 KRT8P26-201ENST00000534154 1276 ntBASIC15.22■□□□□ 0.03
SEC61A1P61619 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.22■□□□□ 0.03
SEC61A1P61619 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.22■□□□□ 0.03
SEC61A1P61619 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.22■□□□□ 0.03
SEC61A1P61619 AC024563.2-201ENST00000603282 481 ntBASIC15.22■□□□□ 0.03
SEC61A1P61619 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.22■□□□□ 0.03
SEC61A1P61619 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.22■□□□□ 0.03
SEC61A1P61619 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.22■□□□□ 0.03
SEC61A1P61619 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SEC61A1P61619 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.22■□□□□ 0.03
SEC61A1P61619 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SEC61A1P61619 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SEC61A1P61619 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
SEC61A1P61619 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SEC61A1P61619 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.21■□□□□ 0.03
SEC61A1P61619 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SEC61A1P61619 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SEC61A1P61619 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.21■□□□□ 0.03
SEC61A1P61619 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.21■□□□□ 0.03
SEC61A1P61619 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms