Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SPCS3P61009 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS3P61009 LINC01311-201ENST00000565162 1445 ntBASIC14.15□□□□□ -0.14
SPCS3P61009 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
SPCS3P61009 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SPCS3P61009 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.15□□□□□ -0.14
SPCS3P61009 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.15□□□□□ -0.14
SPCS3P61009 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 ECEL1P3-201ENST00000427961 737 ntBASIC14.15□□□□□ -0.14
SPCS3P61009 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.15□□□□□ -0.14
SPCS3P61009 ECEL1P2-202ENST00000465689 757 ntBASIC14.15□□□□□ -0.14
SPCS3P61009 AC112698.1-201ENST00000510299 916 ntBASIC14.15□□□□□ -0.14
SPCS3P61009 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.15□□□□□ -0.14
SPCS3P61009 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.15□□□□□ -0.14
SPCS3P61009 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.15□□□□□ -0.14
SPCS3P61009 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.15□□□□□ -0.14
SPCS3P61009 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SPCS3P61009 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SPCS3P61009 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SPCS3P61009 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
SPCS3P61009 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPCS3P61009 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SPCS3P61009 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SPCS3P61009 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.14□□□□□ -0.15
SPCS3P61009 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.14□□□□□ -0.15
SPCS3P61009 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SPCS3P61009 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPCS3P61009 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms