Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN2P57739 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CLDN2P57739 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLDN2P57739 LYSMD4-203ENST00000378904 2122 ntBASIC17.08■□□□□ 0.32
CLDN2P57739 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 AC005332.8-201ENST00000622750 2735 ntBASIC17.07■□□□□ 0.32
CLDN2P57739 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN2P57739 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 DNAJB3-202ENST00000449667 1266 ntBASIC17.07■□□□□ 0.32
CLDN2P57739 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.07■□□□□ 0.32
CLDN2P57739 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.07■□□□□ 0.32
CLDN2P57739 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 AC096734.2-201ENST00000562054 433 ntBASIC17.07■□□□□ 0.32
CLDN2P57739 MIR4469-201ENST00000583919 79 ntBASIC17.07■□□□□ 0.32
CLDN2P57739 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 AL596442.2-201ENST00000610240 980 ntBASIC17.07■□□□□ 0.32
CLDN2P57739 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN2P57739 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLDN2P57739 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN2P57739 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN2P57739 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN2P57739 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLDN2P57739 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN2P57739 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 AC025580.3-201ENST00000617932 1424 ntBASIC17.06■□□□□ 0.32
CLDN2P57739 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN2P57739 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLDN2P57739 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN2P57739 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN2P57739 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN2P57739 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 KRT19P2-202ENST00000557173 1012 ntBASIC17.06■□□□□ 0.32
CLDN2P57739 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN2P57739 AC079781.4-201ENST00000641908 219 ntBASIC17.06■□□□□ 0.32
CLDN2P57739 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN2P57739 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN2P57739 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN2P57739 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN2P57739 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN2P57739 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN2P57739 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN2P57739 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN2P57739 HTR5BP-201ENST00000430851 1154 ntBASIC17.05■□□□□ 0.32
CLDN2P57739 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms