Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NCKAP1LP55160 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1LP55160 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NCKAP1LP55160 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.93■□□□□ 0.62
NCKAP1LP55160 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 AC092910.1-201ENST00000482027 1129 ntBASIC18.92■□□□□ 0.62
NCKAP1LP55160 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 MIR1199-201ENST00000621445 119 ntBASIC18.92■□□□□ 0.62
NCKAP1LP55160 AC117500.6-201ENST00000624871 588 ntBASIC18.92■□□□□ 0.62
NCKAP1LP55160 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.92■□□□□ 0.62
NCKAP1LP55160 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NCKAP1LP55160 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 AP002414.1-201ENST00000391405 1147 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 AC098831.1-202ENST00000438821 336 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 RPS15P9-201ENST00000494093 319 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 IGHV3-22-201ENST00000520721 359 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 TERC-201ENST00000602385 541 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 PGM5P2-202ENST00000637225 1043 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.91■□□□□ 0.62
NCKAP1LP55160 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.91■□□□□ 0.62
NCKAP1LP55160 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NCKAP1LP55160 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.9■□□□□ 0.62
NCKAP1LP55160 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.9■□□□□ 0.62
NCKAP1LP55160 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NCKAP1LP55160 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms