Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H2P55055 AC093010.1-201ENST00000473625 1624 ntBASIC16.48■□□□□ 0.23
NR1H2P55055 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.48■□□□□ 0.23
NR1H2P55055 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NR1H2P55055 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NR1H2P55055 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.48■□□□□ 0.23
NR1H2P55055 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NR1H2P55055 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H2P55055 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H2P55055 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.48■□□□□ 0.23
NR1H2P55055 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.48■□□□□ 0.23
NR1H2P55055 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.48■□□□□ 0.23
NR1H2P55055 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.48■□□□□ 0.23
NR1H2P55055 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
NR1H2P55055 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.48■□□□□ 0.23
NR1H2P55055 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.48■□□□□ 0.23
NR1H2P55055 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H2P55055 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NR1H2P55055 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.48■□□□□ 0.23
NR1H2P55055 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.48■□□□□ 0.23
NR1H2P55055 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NR1H2P55055 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.48■□□□□ 0.23
NR1H2P55055 AL136379.1-201ENST00000623471 2642 ntBASIC16.48■□□□□ 0.23
NR1H2P55055 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NR1H2P55055 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NR1H2P55055 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.47■□□□□ 0.23
NR1H2P55055 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 KRT8P3-201ENST00000519669 1449 ntBASIC16.47■□□□□ 0.23
NR1H2P55055 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NR1H2P55055 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.47■□□□□ 0.23
NR1H2P55055 UPK3BP1-201ENST00000428678 509 ntBASIC16.47■□□□□ 0.23
NR1H2P55055 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.47■□□□□ 0.23
NR1H2P55055 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.47■□□□□ 0.23
NR1H2P55055 AC008622.2-201ENST00000617006 1229 ntBASIC16.47■□□□□ 0.23
NR1H2P55055 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.47■□□□□ 0.23
NR1H2P55055 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NR1H2P55055 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.47■□□□□ 0.23
NR1H2P55055 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NR1H2P55055 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.46■□□□□ 0.23
NR1H2P55055 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 AC092068.3-201ENST00000587894 2016 ntBASIC16.46■□□□□ 0.23
NR1H2P55055 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.46■□□□□ 0.23
NR1H2P55055 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.46■□□□□ 0.23
NR1H2P55055 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.46■□□□□ 0.23
NR1H2P55055 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NR1H2P55055 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
NR1H2P55055 AL031133.1-201ENST00000406807 723 ntBASIC16.46■□□□□ 0.23
NR1H2P55055 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.46■□□□□ 0.23
NR1H2P55055 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
NR1H2P55055 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.46■□□□□ 0.23
NR1H2P55055 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms