Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.75■□□□□ 0.43
ATXN3P54252 AC011467.2-201ENST00000598425 242 ntBASIC17.75■□□□□ 0.43
ATXN3P54252 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.75■□□□□ 0.43
ATXN3P54252 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.75■□□□□ 0.43
ATXN3P54252 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ATXN3P54252 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
ATXN3P54252 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATXN3P54252 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.74■□□□□ 0.43
ATXN3P54252 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.74■□□□□ 0.43
ATXN3P54252 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATXN3P54252 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 AC012317.2-201ENST00000623305 2251 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.74■□□□□ 0.43
ATXN3P54252 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 MTMR9LP-203ENST00000426597 1545 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 YBX2P1-201ENST00000394192 760 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.74■□□□□ 0.43
ATXN3P54252 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
ATXN3P54252 AC027796.2-201ENST00000575326 344 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 AL139288.1-201ENST00000623748 933 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ATXN3P54252 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.74■□□□□ 0.43
ATXN3P54252 AC138028.4-201ENST00000564984 1845 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.74■□□□□ 0.43
ATXN3P54252 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATXN3P54252 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.74■□□□□ 0.43
ATXN3P54252 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 TNRC18P3-201ENST00000441896 2691 ntBASIC17.74■□□□□ 0.43
ATXN3P54252 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATXN3P54252 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ATXN3P54252 AC093677.2-201ENST00000600169 1863 ntBASIC17.73■□□□□ 0.43
ATXN3P54252 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ATXN3P54252 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.73■□□□□ 0.43
ATXN3P54252 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.73■□□□□ 0.43
ATXN3P54252 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 AL138831.2-201ENST00000606564 490 ntBASIC17.73■□□□□ 0.43
ATXN3P54252 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.73■□□□□ 0.43
ATXN3P54252 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 AL645608.8-201ENST00000606034 2086 ntBASIC17.73■□□□□ 0.43
ATXN3P54252 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATXN3P54252 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.73■□□□□ 0.43
ATXN3P54252 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATXN3P54252 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATXN3P54252 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATXN3P54252 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATXN3P54252 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATXN3P54252 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms