Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 MIR661-201ENST00000384842 89 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 PTMS-202ENST00000389462 773 ntTSL 2 BASIC24.5■■□□□ 1.51
CLTCL1P53675 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CLTCL1P53675 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CLTCL1P53675 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC24.5■■□□□ 1.51
CLTCL1P53675 DUX4L27-201ENST00000554796 1261 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CLTCL1P53675 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLTCL1P53675 AJ011932.1-201ENST00000621707 465 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 AL161645.1-201ENST00000622716 1255 ntBASIC24.5■■□□□ 1.51
CLTCL1P53675 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC24.5■■□□□ 1.51
CLTCL1P53675 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CLTCL1P53675 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC24.49■■□□□ 1.51
CLTCL1P53675 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC24.49■■□□□ 1.51
CLTCL1P53675 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC24.49■■□□□ 1.51
CLTCL1P53675 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CLTCL1P53675 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC24.49■■□□□ 1.51
CLTCL1P53675 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC24.49■■□□□ 1.51
CLTCL1P53675 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC24.49■■□□□ 1.51
CLTCL1P53675 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC24.49■■□□□ 1.51
CLTCL1P53675 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC24.49■■□□□ 1.51
CLTCL1P53675 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CLTCL1P53675 AC005237.2-201ENST00000434368 219 ntBASIC24.49■■□□□ 1.51
CLTCL1P53675 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 AC069262.1-201ENST00000539058 672 ntBASIC24.49■■□□□ 1.51
CLTCL1P53675 AQP6-203ENST00000551733 849 ntTSL 3 BASIC24.49■■□□□ 1.51
CLTCL1P53675 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLTCL1P53675 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CLTCL1P53675 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CLTCL1P53675 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.48■■□□□ 1.51
CLTCL1P53675 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
CLTCL1P53675 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CLTCL1P53675 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC24.48■■□□□ 1.51
CLTCL1P53675 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.48■■□□□ 1.51
CLTCL1P53675 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CLTCL1P53675 CCDC74BP1-201ENST00000508880 1123 ntBASIC24.48■■□□□ 1.51
CLTCL1P53675 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC24.48■■□□□ 1.51
CLTCL1P53675 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.48■■□□□ 1.51
CLTCL1P53675 LINC01225-203ENST00000563550 1244 ntBASIC24.48■■□□□ 1.51
CLTCL1P53675 RAB34-224ENST00000636513 888 ntTSL 5 BASIC24.48■■□□□ 1.51
CLTCL1P53675 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLTCL1P53675 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC24.48■■□□□ 1.51
CLTCL1P53675 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CLTCL1P53675 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC24.47■■□□□ 1.51
CLTCL1P53675 GNAS-203ENST00000306120 1878 ntBASIC24.47■■□□□ 1.51
CLTCL1P53675 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CLTCL1P53675 AL138688.1-201ENST00000624851 1594 ntBASIC24.47■■□□□ 1.51
CLTCL1P53675 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC24.47■■□□□ 1.51
CLTCL1P53675 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC24.47■■□□□ 1.51
CLTCL1P53675 RPL30-202ENST00000396070 440 ntTSL 2 BASIC24.47■■□□□ 1.51
CLTCL1P53675 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC24.47■■□□□ 1.51
CLTCL1P53675 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC24.47■■□□□ 1.51
CLTCL1P53675 AL512356.2-201ENST00000546955 174 ntBASIC24.47■■□□□ 1.51
CLTCL1P53675 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC24.47■■□□□ 1.51
CLTCL1P53675 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC24.47■■□□□ 1.51
CLTCL1P53675 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC24.47■■□□□ 1.51
CLTCL1P53675 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 NOC2LP1-202ENST00000452600 2235 ntBASIC24.47■■□□□ 1.51
CLTCL1P53675 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 TPR-209ENST00000613151 2478 ntTSL 5 BASIC24.47■■□□□ 1.51
CLTCL1P53675 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLTCL1P53675 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC24.46■■□□□ 1.51
CLTCL1P53675 LINC00895-201ENST00000629028 1637 ntBASIC24.46■■□□□ 1.51
CLTCL1P53675 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLTCL1P53675 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLTCL1P53675 HLA-DRB6-201ENST00000411500 1235 ntBASIC24.46■■□□□ 1.51
CLTCL1P53675 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC24.46■■□□□ 1.51
CLTCL1P53675 GREM1-201ENST00000560677 623 ntTSL 4 BASIC24.46■■□□□ 1.51
CLTCL1P53675 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms