Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 AC129492.6-201ENST00000611383 1305 ntBASIC18.15■□□□□ 0.5
CLCN4P51793 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CLCN4P51793 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLCN4P51793 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN4P51793 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLCN4P51793 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN4P51793 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CLCN4P51793 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CLCN4P51793 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN4P51793 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 AC002056.1-201ENST00000395613 760 ntBASIC18.14■□□□□ 0.49
CLCN4P51793 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN4P51793 BCRP1-201ENST00000444246 691 ntBASIC18.14■□□□□ 0.49
CLCN4P51793 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN4P51793 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN4P51793 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN4P51793 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLCN4P51793 AL096865.1-201ENST00000606796 927 ntBASIC18.14■□□□□ 0.49
CLCN4P51793 LINC00628-201ENST00000628516 1289 ntBASIC18.14■□□□□ 0.49
CLCN4P51793 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN4P51793 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLCN4P51793 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN4P51793 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN4P51793 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLCN4P51793 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.13■□□□□ 0.49
CLCN4P51793 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.13■□□□□ 0.49
CLCN4P51793 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN4P51793 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLCN4P51793 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN4P51793 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLCN4P51793 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
CLCN4P51793 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.13■□□□□ 0.49
CLCN4P51793 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.13■□□□□ 0.49
CLCN4P51793 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN4P51793 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLCN4P51793 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN4P51793 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLCN4P51793 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN4P51793 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLCN4P51793 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN4P51793 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN4P51793 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN4P51793 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN4P51793 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN4P51793 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms