Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP11P51784 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.54■□□□□ 0.72
USP11P51784 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.54■□□□□ 0.72
USP11P51784 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.54■□□□□ 0.72
USP11P51784 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
USP11P51784 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
USP11P51784 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP11P51784 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.54■□□□□ 0.72
USP11P51784 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.54■□□□□ 0.72
USP11P51784 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.54■□□□□ 0.72
USP11P51784 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP11P51784 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 AC139713.2-201ENST00000641328 2723 ntBASIC19.53■□□□□ 0.72
USP11P51784 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.53■□□□□ 0.72
USP11P51784 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP11P51784 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.53■□□□□ 0.72
USP11P51784 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.53■□□□□ 0.72
USP11P51784 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.53■□□□□ 0.72
USP11P51784 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.53■□□□□ 0.72
USP11P51784 IGHV3-65-201ENST00000523210 341 ntBASIC19.53■□□□□ 0.72
USP11P51784 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 AC145285.3-201ENST00000564603 959 ntBASIC19.53■□□□□ 0.72
USP11P51784 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.53■□□□□ 0.72
USP11P51784 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.53■□□□□ 0.72
USP11P51784 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
USP11P51784 AF228730.7-201ENST00000641842 219 ntBASIC19.53■□□□□ 0.72
USP11P51784 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP11P51784 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
USP11P51784 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
USP11P51784 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.53■□□□□ 0.72
USP11P51784 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP11P51784 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USP11P51784 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP11P51784 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.52■□□□□ 0.72
USP11P51784 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP11P51784 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP11P51784 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.52■□□□□ 0.72
USP11P51784 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP11P51784 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.52■□□□□ 0.72
USP11P51784 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
USP11P51784 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.52■□□□□ 0.72
USP11P51784 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.52■□□□□ 0.72
USP11P51784 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP11P51784 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.52■□□□□ 0.72
USP11P51784 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.52■□□□□ 0.72
USP11P51784 GGTLC5P-201ENST00000617623 998 ntBASIC19.52■□□□□ 0.72
USP11P51784 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP11P51784 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP11P51784 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
USP11P51784 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
USP11P51784 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP11P51784 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
USP11P51784 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP11P51784 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
USP11P51784 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.51■□□□□ 0.71
USP11P51784 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP11P51784 HCG11-201ENST00000411553 5696 ntBASIC19.51■□□□□ 0.71
USP11P51784 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
USP11P51784 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
USP11P51784 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.51■□□□□ 0.71
USP11P51784 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP11P51784 PAWRP1-201ENST00000451083 565 ntBASIC19.51■□□□□ 0.71
USP11P51784 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.51■□□□□ 0.71
USP11P51784 RPL13AP23-201ENST00000480739 586 ntBASIC19.51■□□□□ 0.71
USP11P51784 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.51■□□□□ 0.71
USP11P51784 RNA5SP415-201ENST00000517246 115 ntBASIC19.51■□□□□ 0.71
USP11P51784 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.51■□□□□ 0.71
USP11P51784 UNC93B6-202ENST00000528242 690 ntBASIC19.51■□□□□ 0.71
USP11P51784 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
USP11P51784 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms