Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBP50607 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 SIGLEC30P-201ENST00000455569 941 ntBASIC18.28■□□□□ 0.52
TUBP50607 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 IGHV3-22-201ENST00000520721 359 ntBASIC18.28■□□□□ 0.52
TUBP50607 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.28■□□□□ 0.52
TUBP50607 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TUBP50607 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.28■□□□□ 0.52
TUBP50607 AC105339.3-201ENST00000560043 636 ntBASIC18.28■□□□□ 0.52
TUBP50607 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TUBP50607 AC006557.2-201ENST00000592985 1240 ntBASIC18.28■□□□□ 0.52
TUBP50607 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.28■□□□□ 0.52
TUBP50607 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TUBP50607 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBP50607 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBP50607 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBP50607 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 AC134043.2-201ENST00000624206 2238 ntBASIC18.27■□□□□ 0.52
TUBP50607 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBP50607 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TUBP50607 KRT18P27-201ENST00000427733 1299 ntBASIC18.27■□□□□ 0.52
TUBP50607 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.27■□□□□ 0.52
TUBP50607 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBP50607 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBP50607 AC012640.2-201ENST00000561606 901 ntBASIC18.27■□□□□ 0.52
TUBP50607 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBP50607 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBP50607 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBP50607 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBP50607 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBP50607 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TUBP50607 AC018695.7-201ENST00000624587 2492 ntBASIC18.27■□□□□ 0.51
TUBP50607 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBP50607 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBP50607 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBP50607 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TUBP50607 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TUBP50607 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
TUBP50607 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBP50607 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBP50607 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBP50607 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBP50607 SLC25A1P1-201ENST00000528351 927 ntBASIC18.26■□□□□ 0.51
TUBP50607 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBP50607 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.26■□□□□ 0.51
TUBP50607 AC145285.3-201ENST00000564603 959 ntBASIC18.26■□□□□ 0.51
TUBP50607 AC106730.1-201ENST00000566722 1090 ntBASIC18.26■□□□□ 0.51
TUBP50607 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBP50607 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
TUBP50607 AF228730.7-201ENST00000641842 219 ntBASIC18.26■□□□□ 0.51
TUBP50607 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 AC148477.5-201ENST00000625164 1645 ntBASIC18.26■□□□□ 0.51
TUBP50607 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.26■□□□□ 0.51
TUBP50607 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TUBP50607 AC009336.1-201ENST00000608941 1553 ntBASIC18.25■□□□□ 0.51
TUBP50607 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TUBP50607 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
TUBP50607 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBP50607 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBP50607 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TUBP50607 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBP50607 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.25■□□□□ 0.51
TUBP50607 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms