Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCC3P46736 SLC25A6P2-201ENST00000497974 877 ntBASIC18.38■□□□□ 0.53
BRCC3P46736 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCC3P46736 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.38■□□□□ 0.53
BRCC3P46736 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCC3P46736 KRT19P2-202ENST00000557173 1012 ntBASIC18.38■□□□□ 0.53
BRCC3P46736 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.38■□□□□ 0.53
BRCC3P46736 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.38■□□□□ 0.53
BRCC3P46736 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCC3P46736 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
BRCC3P46736 AC025580.3-201ENST00000617932 1424 ntBASIC18.38■□□□□ 0.53
BRCC3P46736 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 AC134043.2-201ENST00000624206 2238 ntBASIC18.38■□□□□ 0.53
BRCC3P46736 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
BRCC3P46736 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCC3P46736 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.38■□□□□ 0.53
BRCC3P46736 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRCC3P46736 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.38■□□□□ 0.53
BRCC3P46736 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
BRCC3P46736 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.37■□□□□ 0.53
BRCC3P46736 CXCL1P1-201ENST00000502804 216 ntBASIC18.37■□□□□ 0.53
BRCC3P46736 AC005829.1-201ENST00000570002 483 ntBASIC18.37■□□□□ 0.53
BRCC3P46736 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.37■□□□□ 0.53
BRCC3P46736 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.37■□□□□ 0.53
BRCC3P46736 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.37■□□□□ 0.53
BRCC3P46736 AL078644.1-201ENST00000609881 752 ntBASIC18.37■□□□□ 0.53
BRCC3P46736 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BRCC3P46736 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.37■□□□□ 0.53
BRCC3P46736 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRCC3P46736 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BRCC3P46736 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCC3P46736 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCC3P46736 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCC3P46736 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCC3P46736 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCC3P46736 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCC3P46736 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
BRCC3P46736 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCC3P46736 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.36■□□□□ 0.53
BRCC3P46736 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.36■□□□□ 0.53
BRCC3P46736 AC087163.2-201ENST00000457299 853 ntBASIC18.36■□□□□ 0.53
BRCC3P46736 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRCC3P46736 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRCC3P46736 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRCC3P46736 PDPK2P-202ENST00000562415 1191 ntBASIC18.36■□□□□ 0.53
BRCC3P46736 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
BRCC3P46736 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
BRCC3P46736 AP001160.2-201ENST00000596071 487 ntBASIC18.36■□□□□ 0.53
BRCC3P46736 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.36■□□□□ 0.53
BRCC3P46736 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.36■□□□□ 0.53
BRCC3P46736 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BRCC3P46736 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.36■□□□□ 0.53
BRCC3P46736 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BRCC3P46736 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.35■□□□□ 0.53
BRCC3P46736 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BRCC3P46736 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
BRCC3P46736 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
BRCC3P46736 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BRCC3P46736 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BRCC3P46736 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 AC211486.1-202ENST00000416371 468 ntBASIC18.35■□□□□ 0.53
BRCC3P46736 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.35■□□□□ 0.53
BRCC3P46736 AC211476.1-201ENST00000503899 468 ntBASIC18.35■□□□□ 0.53
BRCC3P46736 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.35■□□□□ 0.53
BRCC3P46736 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.35■□□□□ 0.53
BRCC3P46736 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.35■□□□□ 0.53
BRCC3P46736 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.35■□□□□ 0.53
BRCC3P46736 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
BRCC3P46736 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.35■□□□□ 0.53
BRCC3P46736 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.35■□□□□ 0.53
BRCC3P46736 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BRCC3P46736 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRCC3P46736 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.34■□□□□ 0.53
BRCC3P46736 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms