Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.56■□□□□ 0.4
HADHAP40939 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 AC012313.1-201ENST00000593393 3059 ntBASIC17.56■□□□□ 0.4
HADHAP40939 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 INTS4P1-201ENST00000438455 1935 ntBASIC17.56■□□□□ 0.4
HADHAP40939 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HADHAP40939 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.56■□□□□ 0.4
HADHAP40939 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.56■□□□□ 0.4
HADHAP40939 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.56■□□□□ 0.4
HADHAP40939 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.55■□□□□ 0.4
HADHAP40939 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.55■□□□□ 0.4
HADHAP40939 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 AL049757.1-201ENST00000616842 1596 ntBASIC17.55■□□□□ 0.4
HADHAP40939 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.55■□□□□ 0.4
HADHAP40939 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.55■□□□□ 0.4
HADHAP40939 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.55■□□□□ 0.4
HADHAP40939 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.55■□□□□ 0.4
HADHAP40939 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.55■□□□□ 0.4
HADHAP40939 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.55■□□□□ 0.4
HADHAP40939 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HADHAP40939 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HADHAP40939 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HADHAP40939 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.55■□□□□ 0.4
HADHAP40939 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.55■□□□□ 0.4
HADHAP40939 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.55■□□□□ 0.4
HADHAP40939 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 FER1L4-210ENST00000615531 5998 ntBASIC17.54■□□□□ 0.4
HADHAP40939 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHAP40939 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HADHAP40939 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHAP40939 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.54■□□□□ 0.4
HADHAP40939 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHAP40939 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHAP40939 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHAP40939 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 AC116353.5-201ENST00000638148 1699 ntBASIC17.54■□□□□ 0.4
HADHAP40939 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HADHAP40939 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HADHAP40939 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HADHAP40939 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHAP40939 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHAP40939 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHAP40939 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HADHAP40939 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHAP40939 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHAP40939 AL353593.2-201ENST00000602529 1483 ntBASIC17.53■□□□□ 0.4
HADHAP40939 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HADHAP40939 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.53■□□□□ 0.4
HADHAP40939 RCN1P2-201ENST00000398357 915 ntBASIC17.53■□□□□ 0.4
HADHAP40939 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHAP40939 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.53■□□□□ 0.4
HADHAP40939 MIR3652-201ENST00000579335 131 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms