Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP8P40818 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.92■□□□□ 0.62
USP8P40818 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
USP8P40818 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
USP8P40818 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.92■□□□□ 0.62
USP8P40818 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.92■□□□□ 0.62
USP8P40818 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.92■□□□□ 0.62
USP8P40818 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.92■□□□□ 0.62
USP8P40818 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
USP8P40818 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
USP8P40818 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
USP8P40818 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP8P40818 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.92■□□□□ 0.62
USP8P40818 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.91■□□□□ 0.62
USP8P40818 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP8P40818 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.91■□□□□ 0.62
USP8P40818 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 MIR1224-201ENST00000408193 85 ntBASIC18.91■□□□□ 0.62
USP8P40818 AC007967.3-201ENST00000434308 558 ntBASIC18.91■□□□□ 0.62
USP8P40818 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 VENTXP7-201ENST00000475503 772 ntBASIC18.91■□□□□ 0.62
USP8P40818 AC091607.1-201ENST00000490318 1060 ntBASIC18.91■□□□□ 0.62
USP8P40818 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.91■□□□□ 0.62
USP8P40818 AC005336.2-201ENST00000593183 939 ntBASIC18.91■□□□□ 0.62
USP8P40818 AL445228.2-201ENST00000605589 952 ntBASIC18.91■□□□□ 0.62
USP8P40818 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 AL358472.4-201ENST00000633140 710 ntBASIC18.91■□□□□ 0.62
USP8P40818 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
USP8P40818 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.91■□□□□ 0.62
USP8P40818 AC097374.2-201ENST00000618617 1306 ntBASIC18.91■□□□□ 0.62
USP8P40818 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.91■□□□□ 0.62
USP8P40818 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
USP8P40818 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP8P40818 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.9■□□□□ 0.62
USP8P40818 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.9■□□□□ 0.62
USP8P40818 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP8P40818 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.9■□□□□ 0.62
USP8P40818 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP8P40818 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USP8P40818 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
USP8P40818 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP8P40818 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.9■□□□□ 0.62
USP8P40818 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
USP8P40818 AC010331.1-201ENST00000611423 582 ntBASIC18.9■□□□□ 0.62
USP8P40818 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.9■□□□□ 0.62
USP8P40818 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP8P40818 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms