Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 SPDYE11-202ENST00000450699 704 ntBASIC21.81■■□□□ 1.08
COL15A1P39059 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.81■■□□□ 1.08
COL15A1P39059 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.81■■□□□ 1.08
COL15A1P39059 SPDYE9P-201ENST00000570642 692 ntBASIC21.81■■□□□ 1.08
COL15A1P39059 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC21.81■■□□□ 1.08
COL15A1P39059 SPDYE10P-202ENST00000612005 668 ntBASIC21.81■■□□□ 1.08
COL15A1P39059 SPDYE8P-202ENST00000612377 668 ntBASIC21.81■■□□□ 1.08
COL15A1P39059 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COL15A1P39059 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COL15A1P39059 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL15A1P39059 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COL15A1P39059 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.8■■□□□ 1.08
COL15A1P39059 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL15A1P39059 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.8■■□□□ 1.08
COL15A1P39059 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL15A1P39059 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL15A1P39059 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.8■■□□□ 1.08
COL15A1P39059 AC092474.2-201ENST00000424288 719 ntBASIC21.8■■□□□ 1.08
COL15A1P39059 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL15A1P39059 RN7SL589P-201ENST00000481268 310 ntBASIC21.8■■□□□ 1.08
COL15A1P39059 AC067863.1-201ENST00000494933 530 ntBASIC21.8■■□□□ 1.08
COL15A1P39059 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.8■■□□□ 1.08
COL15A1P39059 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.8■■□□□ 1.08
COL15A1P39059 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.8■■□□□ 1.08
COL15A1P39059 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.8■■□□□ 1.08
COL15A1P39059 MIR4745-201ENST00000577608 62 ntBASIC21.8■■□□□ 1.08
COL15A1P39059 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.8■■□□□ 1.08
COL15A1P39059 AC239800.4-201ENST00000603712 296 ntBASIC21.8■■□□□ 1.08
COL15A1P39059 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.8■■□□□ 1.08
COL15A1P39059 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL15A1P39059 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.8■■□□□ 1.08
COL15A1P39059 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.8■■□□□ 1.08
COL15A1P39059 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL15A1P39059 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL15A1P39059 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.79■■□□□ 1.08
COL15A1P39059 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COL15A1P39059 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.79■■□□□ 1.08
COL15A1P39059 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.79■■□□□ 1.08
COL15A1P39059 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.79■■□□□ 1.08
COL15A1P39059 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.79■■□□□ 1.08
COL15A1P39059 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.79■■□□□ 1.08
COL15A1P39059 AL645728.2-201ENST00000641974 660 ntBASIC21.79■■□□□ 1.08
COL15A1P39059 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.79■■□□□ 1.08
COL15A1P39059 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.79■■□□□ 1.08
COL15A1P39059 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
COL15A1P39059 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
COL15A1P39059 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.79■■□□□ 1.08
COL15A1P39059 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL15A1P39059 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.78■■□□□ 1.08
COL15A1P39059 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.78■■□□□ 1.08
COL15A1P39059 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 AL671277.1-201ENST00000429656 993 ntBASIC21.78■■□□□ 1.08
COL15A1P39059 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.78■■□□□ 1.08
COL15A1P39059 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.78■■□□□ 1.08
COL15A1P39059 AC079140.1-201ENST00000508039 487 ntBASIC21.78■■□□□ 1.08
COL15A1P39059 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.78■■□□□ 1.08
COL15A1P39059 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 FAM86C2P-203ENST00000528684 1004 ntBASIC21.78■■□□□ 1.08
COL15A1P39059 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.78■■□□□ 1.08
COL15A1P39059 AL135744.1-201ENST00000565098 629 ntBASIC21.78■■□□□ 1.08
COL15A1P39059 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL15A1P39059 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.78■■□□□ 1.08
COL15A1P39059 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.78■■□□□ 1.08
COL15A1P39059 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.78■■□□□ 1.08
COL15A1P39059 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL15A1P39059 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.78■■□□□ 1.08
COL15A1P39059 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.78■■□□□ 1.08
COL15A1P39059 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL15A1P39059 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.77■■□□□ 1.08
COL15A1P39059 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.77■■□□□ 1.08
COL15A1P39059 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
COL15A1P39059 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL15A1P39059 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms