Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCK1P35558 IGHV3-47-201ENST00000425060 335 ntBASIC18.28■□□□□ 0.52
PCK1P35558 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 AC111152.3-201ENST00000569699 673 ntBASIC18.28■□□□□ 0.52
PCK1P35558 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 AC069148.1-201ENST00000608741 768 ntBASIC18.28■□□□□ 0.52
PCK1P35558 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.28■□□□□ 0.52
PCK1P35558 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.28■□□□□ 0.52
PCK1P35558 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 NFIC-211ENST00000641145 8399 ntBASIC18.28■□□□□ 0.52
PCK1P35558 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.28■□□□□ 0.52
PCK1P35558 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCK1P35558 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.27■□□□□ 0.52
PCK1P35558 AL353593.2-201ENST00000602529 1483 ntBASIC18.27■□□□□ 0.52
PCK1P35558 TP73-AS1-210ENST00000637775 1455 ntBASIC18.27■□□□□ 0.52
PCK1P35558 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.27■□□□□ 0.52
PCK1P35558 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.27■□□□□ 0.52
PCK1P35558 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.27■□□□□ 0.52
PCK1P35558 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCK1P35558 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.27■□□□□ 0.52
PCK1P35558 KRT8P10-201ENST00000450021 1447 ntBASIC18.27■□□□□ 0.52
PCK1P35558 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 ARMC10P1-201ENST00000313754 855 ntBASIC18.27■□□□□ 0.52
PCK1P35558 ATP5G2P1-201ENST00000433580 426 ntBASIC18.27■□□□□ 0.52
PCK1P35558 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.27■□□□□ 0.52
PCK1P35558 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.27■□□□□ 0.52
PCK1P35558 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PCK1P35558 AC010331.1-201ENST00000611423 582 ntBASIC18.27■□□□□ 0.52
PCK1P35558 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.27■□□□□ 0.52
PCK1P35558 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCK1P35558 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCK1P35558 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
PCK1P35558 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 AP001094.4-201ENST00000579008 2176 ntBASIC18.27■□□□□ 0.51
PCK1P35558 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 AC080080.1-201ENST00000625121 2420 ntBASIC18.27■□□□□ 0.51
PCK1P35558 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCK1P35558 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.26■□□□□ 0.51
PCK1P35558 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.26■□□□□ 0.51
PCK1P35558 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.26■□□□□ 0.51
PCK1P35558 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
PCK1P35558 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.26■□□□□ 0.51
PCK1P35558 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.26■□□□□ 0.51
PCK1P35558 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PCK1P35558 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 AC116353.5-201ENST00000638148 1699 ntBASIC18.26■□□□□ 0.51
PCK1P35558 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.26■□□□□ 0.51
PCK1P35558 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
PCK1P35558 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCK1P35558 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.26■□□□□ 0.51
PCK1P35558 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.26■□□□□ 0.51
PCK1P35558 LINC00265-3P-201ENST00000447588 903 ntBASIC18.26■□□□□ 0.51
PCK1P35558 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PCK1P35558 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms