Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.28■□□□□ 0.04
THBS4P35443 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 FAM220CP-201ENST00000395253 831 ntBASIC15.28■□□□□ 0.04
THBS4P35443 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 AC079781.3-201ENST00000449110 356 ntBASIC15.28■□□□□ 0.04
THBS4P35443 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
THBS4P35443 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.28■□□□□ 0.04
THBS4P35443 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.28■□□□□ 0.04
THBS4P35443 AL031008.1-201ENST00000619963 541 ntBASIC15.28■□□□□ 0.04
THBS4P35443 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.28■□□□□ 0.04
THBS4P35443 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.28■□□□□ 0.04
THBS4P35443 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.28■□□□□ 0.04
THBS4P35443 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
THBS4P35443 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.27■□□□□ 0.04
THBS4P35443 AC080080.1-201ENST00000625121 2420 ntBASIC15.27■□□□□ 0.04
THBS4P35443 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 AC016396.2-201ENST00000562575 1417 ntBASIC15.27■□□□□ 0.04
THBS4P35443 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
THBS4P35443 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
THBS4P35443 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.27■□□□□ 0.04
THBS4P35443 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.27■□□□□ 0.04
THBS4P35443 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
THBS4P35443 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.27■□□□□ 0.04
THBS4P35443 AF238378.1-201ENST00000526806 358 ntBASIC15.27■□□□□ 0.04
THBS4P35443 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.27■□□□□ 0.03
THBS4P35443 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
THBS4P35443 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 AC010460.3-201ENST00000511359 1579 ntBASIC15.27■□□□□ 0.03
THBS4P35443 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.27■□□□□ 0.03
THBS4P35443 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.27■□□□□ 0.03
THBS4P35443 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.27■□□□□ 0.03
THBS4P35443 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THBS4P35443 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.26■□□□□ 0.03
THBS4P35443 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
THBS4P35443 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.26■□□□□ 0.03
THBS4P35443 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
THBS4P35443 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
THBS4P35443 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.26■□□□□ 0.03
THBS4P35443 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.26■□□□□ 0.03
THBS4P35443 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
THBS4P35443 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.26■□□□□ 0.03
THBS4P35443 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.26■□□□□ 0.03
THBS4P35443 AL121912.1-201ENST00000603683 238 ntBASIC15.26■□□□□ 0.03
THBS4P35443 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.26■□□□□ 0.03
THBS4P35443 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
THBS4P35443 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
THBS4P35443 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.26■□□□□ 0.03
THBS4P35443 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THBS4P35443 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
THBS4P35443 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
THBS4P35443 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.25■□□□□ 0.03
THBS4P35443 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
THBS4P35443 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
THBS4P35443 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THBS4P35443 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.25■□□□□ 0.03
THBS4P35443 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms