Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.33■□□□□ 0.53
CTNNA1P35221 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.33■□□□□ 0.53
CTNNA1P35221 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.33■□□□□ 0.53
CTNNA1P35221 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.33■□□□□ 0.52
CTNNA1P35221 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CTNNA1P35221 AC007967.3-201ENST00000434308 558 ntBASIC18.33■□□□□ 0.52
CTNNA1P35221 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.33■□□□□ 0.52
CTNNA1P35221 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.33■□□□□ 0.52
CTNNA1P35221 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.33■□□□□ 0.52
CTNNA1P35221 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.33■□□□□ 0.52
CTNNA1P35221 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.33■□□□□ 0.52
CTNNA1P35221 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTNNA1P35221 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.33■□□□□ 0.52
CTNNA1P35221 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNNA1P35221 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 AC092647.4-201ENST00000457211 535 ntBASIC18.32■□□□□ 0.52
CTNNA1P35221 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CTNNA1P35221 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNNA1P35221 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNNA1P35221 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
CTNNA1P35221 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 AC093525.9-201ENST00000624961 1746 ntBASIC18.32■□□□□ 0.52
CTNNA1P35221 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTNNA1P35221 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTNNA1P35221 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.32■□□□□ 0.52
CTNNA1P35221 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CTNNA1P35221 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.31■□□□□ 0.52
CTNNA1P35221 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CTNNA1P35221 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.31■□□□□ 0.52
CTNNA1P35221 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.31■□□□□ 0.52
CTNNA1P35221 MYCLP1-201ENST00000372451 1075 ntBASIC18.31■□□□□ 0.52
CTNNA1P35221 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.31■□□□□ 0.52
CTNNA1P35221 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNNA1P35221 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.31■□□□□ 0.52
CTNNA1P35221 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.31■□□□□ 0.52
CTNNA1P35221 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.31■□□□□ 0.52
CTNNA1P35221 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms