Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.69■□□□□ 0.74
CNGA1P29973 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CNGA1P29973 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CNGA1P29973 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.69■□□□□ 0.74
CNGA1P29973 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CNGA1P29973 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
CNGA1P29973 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CNGA1P29973 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CNGA1P29973 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CNGA1P29973 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 AC092474.2-201ENST00000424288 719 ntBASIC19.68■□□□□ 0.74
CNGA1P29973 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.68■□□□□ 0.74
CNGA1P29973 COX20P2-201ENST00000452636 358 ntBASIC19.68■□□□□ 0.74
CNGA1P29973 IGHV3-52-201ENST00000519770 353 ntBASIC19.68■□□□□ 0.74
CNGA1P29973 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 OR7E47P-204ENST00000575924 449 ntBASIC19.68■□□□□ 0.74
CNGA1P29973 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CNGA1P29973 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.68■□□□□ 0.74
CNGA1P29973 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.68■□□□□ 0.74
CNGA1P29973 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CNGA1P29973 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.68■□□□□ 0.74
CNGA1P29973 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNGA1P29973 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CNGA1P29973 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
CNGA1P29973 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CNGA1P29973 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CNGA1P29973 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CNGA1P29973 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.67■□□□□ 0.74
CNGA1P29973 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.67■□□□□ 0.74
CNGA1P29973 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.67■□□□□ 0.74
CNGA1P29973 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.67■□□□□ 0.74
CNGA1P29973 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.67■□□□□ 0.74
CNGA1P29973 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.67■□□□□ 0.74
CNGA1P29973 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.67■□□□□ 0.74
CNGA1P29973 AC239800.4-201ENST00000603712 296 ntBASIC19.67■□□□□ 0.74
CNGA1P29973 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.67■□□□□ 0.74
CNGA1P29973 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.67■□□□□ 0.74
CNGA1P29973 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CNGA1P29973 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 PI4KAP1-204ENST00000612579 1703 ntBASIC19.67■□□□□ 0.74
CNGA1P29973 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.67■□□□□ 0.74
CNGA1P29973 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNGA1P29973 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CNGA1P29973 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNGA1P29973 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 NOC2LP1-202ENST00000452600 2235 ntBASIC19.66■□□□□ 0.74
CNGA1P29973 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.66■□□□□ 0.74
CNGA1P29973 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.66■□□□□ 0.74
CNGA1P29973 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CNGA1P29973 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNGA1P29973 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms