Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
XPAP23025 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 AC046185.3-201ENST00000623228 1824 ntBASIC17.51■□□□□ 0.39
XPAP23025 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
XPAP23025 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
XPAP23025 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.51■□□□□ 0.39
XPAP23025 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 LINC00304-203ENST00000565008 1864 ntBASIC17.5■□□□□ 0.39
XPAP23025 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
XPAP23025 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 AC097637.2-201ENST00000624096 1997 ntBASIC17.5■□□□□ 0.39
XPAP23025 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.5■□□□□ 0.39
XPAP23025 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.5■□□□□ 0.39
XPAP23025 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 MIR7706-201ENST00000613747 67 ntBASIC17.5■□□□□ 0.39
XPAP23025 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
XPAP23025 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
XPAP23025 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.5■□□□□ 0.39
XPAP23025 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
XPAP23025 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
XPAP23025 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
XPAP23025 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
XPAP23025 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
XPAP23025 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 AL022342.1-201ENST00000400363 863 ntBASIC17.49■□□□□ 0.39
XPAP23025 RNA5SP419-201ENST00000515908 135 ntBASIC17.49■□□□□ 0.39
XPAP23025 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.49■□□□□ 0.39
XPAP23025 BX640515.1-201ENST00000617215 977 ntBASIC17.49■□□□□ 0.39
XPAP23025 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
XPAP23025 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 GNAS-203ENST00000306120 1878 ntBASIC17.49■□□□□ 0.39
XPAP23025 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
XPAP23025 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.49■□□□□ 0.39
XPAP23025 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
XPAP23025 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
XPAP23025 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
XPAP23025 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.48■□□□□ 0.39
XPAP23025 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
XPAP23025 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 AC133963.1-201ENST00000504166 1679 ntBASIC17.48■□□□□ 0.39
XPAP23025 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.48■□□□□ 0.39
XPAP23025 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 IL9RP2-201ENST00000423948 1312 ntBASIC17.48■□□□□ 0.39
XPAP23025 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.48■□□□□ 0.39
XPAP23025 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
XPAP23025 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.48■□□□□ 0.39
XPAP23025 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.48■□□□□ 0.39
XPAP23025 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.48■□□□□ 0.39
XPAP23025 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.48■□□□□ 0.39
XPAP23025 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.48■□□□□ 0.39
XPAP23025 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
XPAP23025 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
XPAP23025 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms