Protein–RNA interactions for Protein: P22455

FGFR4, Fibroblast growth factor receptor 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4P22455 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 MIR1233-2-201ENST00000408138 82 ntBASIC19.09■□□□□ 0.65
FGFR4P22455 MIR1233-1-201ENST00000408722 82 ntBASIC19.09■□□□□ 0.65
FGFR4P22455 LINC00982-205ENST00000420957 435 ntBASIC19.09■□□□□ 0.65
FGFR4P22455 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.09■□□□□ 0.65
FGFR4P22455 AC108073.2-201ENST00000464002 357 ntBASIC19.09■□□□□ 0.65
FGFR4P22455 RPS15P9-201ENST00000494093 319 ntBASIC19.09■□□□□ 0.65
FGFR4P22455 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.09■□□□□ 0.65
FGFR4P22455 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.09■□□□□ 0.65
FGFR4P22455 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.09■□□□□ 0.65
FGFR4P22455 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.09■□□□□ 0.65
FGFR4P22455 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FGFR4P22455 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
FGFR4P22455 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
FGFR4P22455 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.09■□□□□ 0.65
FGFR4P22455 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.09■□□□□ 0.65
FGFR4P22455 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FGFR4P22455 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
FGFR4P22455 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FGFR4P22455 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FGFR4P22455 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FGFR4P22455 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FGFR4P22455 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FGFR4P22455 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.08■□□□□ 0.65
FGFR4P22455 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.08■□□□□ 0.65
FGFR4P22455 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.08■□□□□ 0.65
FGFR4P22455 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FGFR4P22455 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.08■□□□□ 0.65
FGFR4P22455 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FGFR4P22455 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FGFR4P22455 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
FGFR4P22455 GNAS-203ENST00000306120 1878 ntBASIC19.08■□□□□ 0.65
FGFR4P22455 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.08■□□□□ 0.64
FGFR4P22455 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
FGFR4P22455 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
FGFR4P22455 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.08■□□□□ 0.64
FGFR4P22455 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.08■□□□□ 0.64
FGFR4P22455 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.08■□□□□ 0.64
FGFR4P22455 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.08■□□□□ 0.64
FGFR4P22455 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
FGFR4P22455 RNA5SP416-201ENST00000516838 111 ntBASIC19.08■□□□□ 0.64
FGFR4P22455 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.08■□□□□ 0.64
FGFR4P22455 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.08■□□□□ 0.64
FGFR4P22455 AC010327.4-202ENST00000591484 748 ntBASIC19.08■□□□□ 0.64
FGFR4P22455 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
FGFR4P22455 PGM5P2-202ENST00000637225 1043 ntBASIC19.08■□□□□ 0.64
FGFR4P22455 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.08■□□□□ 0.64
FGFR4P22455 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
FGFR4P22455 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FGFR4P22455 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.08■□□□□ 0.64
FGFR4P22455 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
FGFR4P22455 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.07■□□□□ 0.64
FGFR4P22455 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
FGFR4P22455 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
FGFR4P22455 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
FGFR4P22455 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
FGFR4P22455 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.07■□□□□ 0.64
FGFR4P22455 AC005104.2-201ENST00000427818 678 ntBASIC19.07■□□□□ 0.64
FGFR4P22455 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.07■□□□□ 0.64
FGFR4P22455 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.07■□□□□ 0.64
FGFR4P22455 AC055717.3-201ENST00000622967 595 ntBASIC19.07■□□□□ 0.64
FGFR4P22455 AC004790.2-201ENST00000623588 572 ntBASIC19.07■□□□□ 0.64
FGFR4P22455 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
FGFR4P22455 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FGFR4P22455 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.07■□□□□ 0.64
FGFR4P22455 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms