Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CCL1P22362 BNIP3P18-201ENST00000593976 575 ntBASIC14.91□□□□□ -0.02
CCL1P22362 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.91□□□□□ -0.02
CCL1P22362 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCL1P22362 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCL1P22362 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 RNF216P1-203ENST00000404404 2427 ntBASIC14.91□□□□□ -0.02
CCL1P22362 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 KRT18P1-202ENST00000452408 1331 ntBASIC14.91□□□□□ -0.02
CCL1P22362 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.91□□□□□ -0.02
CCL1P22362 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCL1P22362 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.9□□□□□ -0.02
CCL1P22362 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.9□□□□□ -0.02
CCL1P22362 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.9□□□□□ -0.02
CCL1P22362 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.9□□□□□ -0.02
CCL1P22362 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.9□□□□□ -0.02
CCL1P22362 AP002383.4-201ENST00000442518 975 ntBASIC14.9□□□□□ -0.02
CCL1P22362 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.9□□□□□ -0.02
CCL1P22362 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.9□□□□□ -0.02
CCL1P22362 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.9□□□□□ -0.02
CCL1P22362 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.9□□□□□ -0.02
CCL1P22362 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCL1P22362 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.9□□□□□ -0.02
CCL1P22362 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCL1P22362 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CCL1P22362 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CCL1P22362 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCL1P22362 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CCL1P22362 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL1P22362 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 NSUN5P1-202ENST00000421140 1535 ntBASIC14.89□□□□□ -0.03
CCL1P22362 NSUN5P2-203ENST00000457352 1529 ntBASIC14.89□□□□□ -0.03
CCL1P22362 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCL1P22362 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 IGHV3-47-201ENST00000425060 335 ntBASIC14.89□□□□□ -0.03
CCL1P22362 ACTG1P4-201ENST00000425123 1122 ntBASIC14.89□□□□□ -0.03
CCL1P22362 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.89□□□□□ -0.03
CCL1P22362 KRT17P6-201ENST00000453795 1220 ntBASIC14.89□□□□□ -0.03
CCL1P22362 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCL1P22362 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.89□□□□□ -0.03
CCL1P22362 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCL1P22362 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL1P22362 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL1P22362 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL1P22362 AP000867.4-201ENST00000641616 219 ntBASIC14.89□□□□□ -0.03
CCL1P22362 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.89□□□□□ -0.03
CCL1P22362 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.89□□□□□ -0.03
CCL1P22362 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL1P22362 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL1P22362 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL1P22362 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms