Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 RNF216P1-203ENST00000404404 2427 ntBASIC18.07■□□□□ 0.48
TCF4P15884 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
TCF4P15884 POM121L3P-201ENST00000419331 1163 ntBASIC18.07■□□□□ 0.48
TCF4P15884 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.07■□□□□ 0.48
TCF4P15884 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.07■□□□□ 0.48
TCF4P15884 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.07■□□□□ 0.48
TCF4P15884 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.07■□□□□ 0.48
TCF4P15884 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 FLJ38576-201ENST00000623820 2459 ntBASIC18.07■□□□□ 0.48
TCF4P15884 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCF4P15884 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.06■□□□□ 0.48
TCF4P15884 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TCF4P15884 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TCF4P15884 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.06■□□□□ 0.48
TCF4P15884 NUS1P1-201ENST00000446295 882 ntBASIC18.06■□□□□ 0.48
TCF4P15884 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TCF4P15884 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.06■□□□□ 0.48
TCF4P15884 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.06■□□□□ 0.48
TCF4P15884 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.06■□□□□ 0.48
TCF4P15884 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.06■□□□□ 0.48
TCF4P15884 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.06■□□□□ 0.48
TCF4P15884 AP001269.4-201ENST00000609611 512 ntBASIC18.06■□□□□ 0.48
TCF4P15884 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TCF4P15884 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.06■□□□□ 0.48
TCF4P15884 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TCF4P15884 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.06■□□□□ 0.48
TCF4P15884 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCF4P15884 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 EGFEM1P-202ENST00000431685 1563 ntBASIC18.05■□□□□ 0.48
TCF4P15884 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
TCF4P15884 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TCF4P15884 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.05■□□□□ 0.48
TCF4P15884 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.05■□□□□ 0.48
TCF4P15884 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 SPDYE21P-201ENST00000413323 827 ntBASIC18.05■□□□□ 0.48
TCF4P15884 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.05■□□□□ 0.48
TCF4P15884 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.05■□□□□ 0.48
TCF4P15884 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
TCF4P15884 AL732292.2-201ENST00000609649 430 ntBASIC18.05■□□□□ 0.48
TCF4P15884 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TCF4P15884 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.05■□□□□ 0.48
TCF4P15884 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.05■□□□□ 0.48
TCF4P15884 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.05■□□□□ 0.48
TCF4P15884 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.05■□□□□ 0.48
TCF4P15884 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TCF4P15884 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TCF4P15884 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.04■□□□□ 0.48
TCF4P15884 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.04■□□□□ 0.48
TCF4P15884 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TCF4P15884 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms