Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 AC092910.1-201ENST00000482027 1129 ntBASIC20.37■□□□□ 0.85
TOP1P11387 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.37■□□□□ 0.85
TOP1P11387 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 IGHV3-22-201ENST00000520721 359 ntBASIC20.37■□□□□ 0.85
TOP1P11387 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.37■□□□□ 0.85
TOP1P11387 SLC25A1P1-201ENST00000528351 927 ntBASIC20.37■□□□□ 0.85
TOP1P11387 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.37■□□□□ 0.85
TOP1P11387 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 AC004706.3-202ENST00000621574 984 ntBASIC20.37■□□□□ 0.85
TOP1P11387 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.36■□□□□ 0.85
TOP1P11387 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 AC097637.2-201ENST00000624096 1997 ntBASIC20.36■□□□□ 0.85
TOP1P11387 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.36■□□□□ 0.85
TOP1P11387 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.36■□□□□ 0.85
TOP1P11387 AC073621.1-201ENST00000392730 636 ntBASIC20.36■□□□□ 0.85
TOP1P11387 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.36■□□□□ 0.85
TOP1P11387 AC098831.1-202ENST00000438821 336 ntBASIC20.36■□□□□ 0.85
TOP1P11387 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.36■□□□□ 0.85
TOP1P11387 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.36■□□□□ 0.85
TOP1P11387 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.36■□□□□ 0.85
TOP1P11387 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TOP1P11387 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.36■□□□□ 0.85
TOP1P11387 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.36■□□□□ 0.85
TOP1P11387 AC012313.1-201ENST00000593393 3059 ntBASIC20.36■□□□□ 0.85
TOP1P11387 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP1P11387 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.36■□□□□ 0.85
TOP1P11387 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.35■□□□□ 0.85
TOP1P11387 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TOP1P11387 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.35■□□□□ 0.85
TOP1P11387 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.35■□□□□ 0.85
TOP1P11387 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.35■□□□□ 0.85
TOP1P11387 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.35■□□□□ 0.85
TOP1P11387 AL356488.2-201ENST00000602755 427 ntBASIC20.35■□□□□ 0.85
TOP1P11387 AF228730.7-201ENST00000641842 219 ntBASIC20.35■□□□□ 0.85
TOP1P11387 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.35■□□□□ 0.85
TOP1P11387 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.35■□□□□ 0.85
TOP1P11387 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.35■□□□□ 0.85
TOP1P11387 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TOP1P11387 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.35■□□□□ 0.85
TOP1P11387 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.35■□□□□ 0.85
TOP1P11387 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
TOP1P11387 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TOP1P11387 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.34■□□□□ 0.85
TOP1P11387 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TOP1P11387 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
TOP1P11387 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.34■□□□□ 0.85
TOP1P11387 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TOP1P11387 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TOP1P11387 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TOP1P11387 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.34■□□□□ 0.85
TOP1P11387 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.34■□□□□ 0.85
TOP1P11387 RPL13AP23-201ENST00000480739 586 ntBASIC20.34■□□□□ 0.85
TOP1P11387 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.34■□□□□ 0.85
TOP1P11387 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TOP1P11387 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.34■□□□□ 0.85
TOP1P11387 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.34■□□□□ 0.85
TOP1P11387 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.34■□□□□ 0.85
TOP1P11387 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.34■□□□□ 0.85
TOP1P11387 AL139424.1-201ENST00000607572 797 ntBASIC20.34■□□□□ 0.85
TOP1P11387 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms